BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F09SP1|AL425904
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 1663 0.0
>3x_Contig1782
Length = 24703
Score = 1663 bits (839), Expect = 0.0
Identities = 846/847 (99%), Gaps = 1/847 (0%)
Strand = Plus / Plus
Query: 1 caaattctgtcatcagatatattcaagagcatggcttgtacgtaaaccaaactgaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13655 caaattctgtcatcagatatattcaagagcatggcttgtacgtaaaccaaactgaaccag 13714
Query: 61 tgaaa-aagttatcggtaacaaggattgagtgtgacactaattgttctaatcacatattc 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13715 tgaaacaagttatcggtaacaaggattgagtgtgacactaattgttctaatcacatattc 13774
Query: 120 tccttctcctttctagactcctccctggtcagactcacgtgatgtctttaactcgaagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13775 tccttctcctttctagactcctccctggtcagactcacgtgatgtctttaactcgaagat 13834
Query: 180 aatatacacacaaattgtaacagtttttagttagttgaaatcctttttataatagaagtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13835 aatatacacacaaattgtaacagtttttagttagttgaaatcctttttataatagaagtt 13894
Query: 240 cttaatcaacaatagtatttgtcgtctagcgaaagttgcgcatgctgttatcctttgatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13895 cttaatcaacaatagtatttgtcgtctagcgaaagttgcgcatgctgttatcctttgatc 13954
Query: 300 tagctccgtaacgatgactgctgcagacagatggaaggattatgcctgtgtaacatccct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13955 tagctccgtaacgatgactgctgcagacagatggaaggattatgcctgtgtaacatccct 14014
Query: 360 tttcgtggctgttgcatcgttatactatgcatataaggttaagacaactacattaactgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14015 tttcgtggctgttgcatcgttatactatgcatataaggttaagacaactacattaactgc 14074
Query: 420 tctatcaccaccaaaggatggagtggaagacttgataggaaatacaccaatggtaagaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14075 tctatcaccaccaaaggatggagtggaagacttgataggaaatacaccaatggtaagaat 14134
Query: 480 taaatctctttccgattatactggtttgaacgtttttgccaaaatggagttaaataatcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14135 taaatctctttccgattatactggtttgaacgtttttgccaaaatggagttaaataatcc 14194
Query: 540 aggtggtagcgcaaaggacagagttgccttgaatattatcaaaaccatctcatcgcagga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14195 aggtggtagcgcaaaggacagagttgccttgaatattatcaaaaccatctcatcgcagga 14254
Query: 600 aggtattaagggttcaagtgataagaaaaatagaatctttgaaggaacaagcggatctac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14255 aggtattaagggttcaagtgataagaaaaatagaatctttgaaggaacaagcggatctac 14314
Query: 660 aggtatatcccttgcaatatgttgtaacgcgttgggttactcatgccatatctcgctacc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14315 aggtatatcccttgcaatatgttgtaacgcgttgggttactcatgccatatctcgctacc 14374
Query: 720 ggacgatacaagccaagagaaactttctcttttaactgcacttggtgcaatagtgaacaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14375 ggacgatacaagccaagagaaactttctcttttaactgcacttggtgcaatagtgaacaa 14434
Query: 780 ggtaaaacctgctagtatagtggatccgaaccaatacgtaaatgcagctaagtcgtgttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14435 ggtaaaacctgctagtatagtggatccgaaccaatacgtaaatgcagctaagtcgtgttc 14494
Query: 840 agaagag 846
|||||||
Sbjct: 14495 agaagag 14501
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6181
Number of Sequences: 1807
Number of extensions: 6181
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)